Endomicroscopy Tutorial Videos
Dear Visitors of the Learning Center for Endomicroscopy. Here you will find tutorial videos that will help you managing and processing your confocal data right. There are four videos available in total. You can download the videos as one package or each one seperately.
Please download install the Xvid Codec free of charge, so you can watch my videos. Or even better get the VLC player, which has all necessary codecs built-in.
Downloads:
- Download all four videos in one package: Endomicroscopy Tutorial Videos
- Download ImageJ (with Optiscan plugin) to open .zip procedures: ImageJ (Optiscan Version)
- Download Slide Show Movie Maker: SSMM
In case you are prompted for a password use the same credentials you got from me during my presentation.
Videos
Exporting Data in RAW Format
This video tutorial will show you the basics of how to export your data in RAW format using the clinical software. This is best for archiving purposes. I recommend backing up your data once a month.
Exporting Data in Image Format
In order to be able to embed confocal images in your powerpoint presentations or papers, you need to export data out of the clinical software. This video covers how to export data in standard .jpeg format.
Building an Image Sequence
You can build Image Sequences using the Slide Show Movie Maker, a freeware program.
Building a 3D Model
Using ImageJ you can create a 3D reconstruction out of confocal image data.
I hope these videos will make dealing with your confocal data easier. You can get in touch with me via my contact form. Or find me on facebook and twitter.
Hi,
Would it be possible for me to register with your site?
I have used the Pentax CLE and wish to review the images in more detail.
Best wishes
David
Hi John,
Not sure what you mean or how registering with my blog would help you in reviewing the images in more detail (?).
Can you provide more info and I will see what I can do.
Cheers.
Constantin
Dear Con Schneider,
My name is Joao Barreto and I am with the Electrical Engineering Dept. at the University of Coimbra. We are engaged in a research project that aims processing confocal endomicroscopic images and perform computer aided diagnosis. Our medical partners have a Pentax CLE and I believe that the tutorials in your website will be very helpful to us. Cna you grant us access by providing an username and password for downloading the materials?
Thanks for your attention
Joao P. Barreto
Hi Joao,
I emailed you the credentials. All the best for your research.
Constantin